You have posted so many pictures it's hard to see what you think may be going on. I'm not sure if there were changes made ot not. Don't get hung up on whether the pattern should be centered on the tooth left to right. Sometimes it happens, sometimes it doesn't.
Some of your pics show what I would consider a runnable pattern, some show it is shallow, and some show it as deep. Your pic of the pinion head has a bright glare on it rendering it unreadable.
Do this.......take brakleen and remove all of the current marking compound as best you can. Then apply a very thin/light coat...only enough to turn it yellow. No need for gobs of the stuff. Only apply it to three teeth, at three different points. Hold pressure on the ring gear when cycling it through the pinion. Take three pics (not 12 lol), one of the drive side, one of the coast side, and one of the pinion.